Dvir Netanely - Bioinformatics Projects

C. Elegans Vulval Development

Reactive Flash animation, responding in real time to events occurring in a computational model of a biological system.

The idea was to create a generic object oriented animation to biological simulations modeled by the Rhapsody software platform.

Weizmann institute of Science, 2004

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* Supervised by Dr. Jasmin Fisher

SRTF - Small RNA Target Finder

SRTF is a bioinformatic program, written in Perl, which grades all E. Coli genes by their relative quality as target genes for a given sRNA sequence. The program uses different parameters to score each gene, including free energy calculations, secondary structure of the given sRNA sequence and analysis of sRNA-target gene match pattern.

The Hebrew University in Jerusalem, 2003

Open Demo web site

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* A joint project with Noa Gordon

PROFILER - Gene expression analysis tool

Profiler is an interactive Matlab based tool, used to analyze gene expression data using a graphical user interface.  Profiler was designed to cluster, analyze and display data originating from Affymetrix microarrays (DNA chips).

Weizmann institute of science, 2006

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Profiler tutorial (PDF)